Recently, the industry of fish hatchery was developed in Taiwan, but many problems remained to be resolved. Among of them, bacterial diseases,virus or the size of living food are considered to be a major cause of mortality in fish hatcheries. Therefore, the use of probiotics to control potential pathogens is developed. In this study, the aim is to utilize probiotics ,microalgae and organic matter via living food carriers such as protozoa, rotifer or copepod nauplii in the larval culture of marine fish to inhibit the vibrio spp.and promote the survival rate of larvae.The size of protozoa are often smaller than rotifer and copepod nauplii as alternative food sources for the smaller mouth of marine fish larvae. The aim of this study is to develop a cultural technique of protozoa and used for the fish larvae rearing experiment. Ciliate, Euplotes sp. was isolated from the culture pond outdoors and pure culture in the laboratory. To develop a cultural technique of protozoa, three kinds of food as following: artificial fermented liquid, bread yeast and microalgae (Isochrysis galbana) were used as the food for this experiment. Each treatment was three triplicates. The cultures were carried out on 500 ml glass beakers at the water temperature 25 ± 1℃and salinity of 25 psu. The initial density of Euplotes sp. was 10 cells/ml The result showed that the total average production of treatments and control is 3090 ± 856, 1110 ± 221 , 163 ± 31 and 11 ± 4 cells/ml, respectively. In conclusion, Euplotes sp. grows fast and attains high densities in feeding artificial fermented liquid treatment.The contribution of ciliates as the first living food source to survival of first feeding red-spotted grouper larvae, Epinephelus coioides, was examined in rearing experiment. The larvae were exposed to a ciliate, Euplotes sp. at the density of 3 cells/ml plus control without ciliates. Higher survival of the larvae over the first 6-7 days was observed by feeding Euplotes sp. The result suggested that ciliates Euplotes sp. could be as alternative food sources to larger living food by promoting the survival of fish larvae.