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建立水產種原生物資訊管理平台

  • 日期:107-02-20
  • 計畫編號:107農科-15.1.2-水-A1
  • 年度:2018
  • 領域:農業生物經濟
  • 主持人:呂逸林
  • 研究人員:城振誠、曾福生

      為完整蒐集國內重要水產種原生物相關資料,提供發展水產生物相關基因體 科 技之研究與應用所需之基礎資料。本計畫針對現有水產生物種原庫保種物種的保 種過程進行分析,結合資訊技術,完成系統分析與表單定義,整合水產生物種原各 類資訊,發展所需的資料庫程式,並建立資訊管理平台。一方面滿足水產生物種原 庫營內部運管理需求,提供為未來種原庫發展水產生物基因體科學研究與應用開發 的重要資料庫,並設置網頁讓一般民眾暸解水產種原生物育種研究之成績與發展現 況,以利社會瞭解種原保存之價值與意義。並建立種原庫優良種苗供售管道,滿足 國內養殖產業的發展與利用,以及提供國內外相關研究人員查詢現有保存的水產種 原生物內容工具,以利水產生物種原的交流與利用,提昇種原利用效率。

    資料庫之設計與建立,整合水產種原生物的生態資料、經濟資料、重要性狀資 料與遺傳資料等,並持續蒐集與種原相關己發表的研究成果,進行種原生物資訊管 理技術之交流。並能監控水產生物種原遺傳歧異度,降低水產生物種原庫保種物種 基因劣化風險。目前資料庫己蒐集62種水產生物種原資料,包括魚類(含淡水與海水 )50種,甲殼類6種,軟體動物1種,藻類4種,袋形動物(輪蟲)1 種,資料庫內 容包括水產種原生物養殖、成長檢測、影音與研究成果相關資料累計達47000筆以上 ,遺傳資料部分建立尼羅吳郭魚性別相關微衛星基因座LG3-GM354(39筆),LG23- UNH898(157筆), LG3-UNH168(32筆) 全子代遺傳資料、澎湖章魚和觀賞蝦約667筆 ,並整理NBCI中與種原庫種原生物相關之鑑種標記約150種。

研究報告摘要(英)


  In order to collect the relevant information onimportant aquatic germplasm in Taiwan, and provide the basic data needed for the research and application of genetic technologies related to aquatic products. This project analyzes the conservation processes of the aquatic germplasm species , combines information technology, information system analysis and tables definition, integrates the germplasm information , develops database programs, and establishes Information management platform. On the one hand, to satisfy the needs of the management of the aquatic germplasm, provides an important database for the development of genetic research and application development of aquatic germplasm, and sets up a website for the public to understand the achievements of aquatic species breeding research. And the current situation of development, in order to benefit the society to understand the value and significance of the germplasm conservation. And establish a pipeline for the supply and sale of excellent seedlings in the germplasml bank, to meet the development and utilization of the domestic aquaculture industry, and to provide relevant domestic and foreign researchers to inquire about the existing preserved aquatic germplasm tools, in order to facilitate the exchange and utilization of the aquatic germplasm, to improve utilization efficiency.The design and establishment of the database, integration of ecological data, economic data, importance characters data and genetic data of aquatic species, and the continuous collection of research results published about the aquatic germplasm, and the exchange of information. It can also monitor the original genetic diversity of aquatic germplasm and reduce the risk of genetic deterioration. At present, the database has collected the information of 62 kinds aquatic germplasm species, including 50 species of fish ( fresh water and seawater), 6 species of crustaceans, 1 species of mollusks, 4 species of algae, and 1 species of Aschelminthes (rotifers). The content includes more than 47,000 related data on aquaculture, growth records, mediums and research results of aquatic species, and establishes whole child's genetic data of Tilapia's gender-related microsatellite locus LG3-GM354 (39 ), LG23-UNH898 ( 157), LG3-UNH168 (32 ) , octopus and ornamental shrimp about 667 and sort out about 150 species of taxa markers related toaquatic germplasmin NBCI database.