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利用RAPD探討九孔 (Haliotis diversicolor) 歷年遺傳變異之變化

  • 出版日期:112-10-31
  • 標題title(英):
    Using Random Amplified Polymorphic DNA to Study Historical Genetic Variation in the Abalone (Haliotis diversicolor)
  • 作者:杜金蓮•朱惠真•王姿文•黃奕瑄•游蓁•曾福生
  • 作者auther(英):Jin-Lien Du, Huei-Jen Ju, Zi-Wen Wang, Yi-Hsuan Huang, Chen Yu and Fu-Sheng Tseng
  • 卷別:31
  • 期別:1
  • 頁碼:1-12

九孔 (Haliotis diversicolor) 為臺灣極具特色之養殖物種,本研究以RAPD (random amplified polymorphic DNA) 技術,針對P3基因座樣態,比較歷年 (2008-2021) 採集之九孔的遺傳變異變化。結果顯示,早期採集的野生九孔具有8–12條多型性擴增帶,主要落於0.1–1.0 kb之間,而養殖九孔之多型性擴增帶則以1.0、0.8及0.65 kb為主,且部分樣本出現條帶之深淺差異及遺漏狀況,顯示經過長期之人為選配,養殖九孔有遺傳變異與存活率降低之現象。為改善育成苗存活率不佳之問題,產業界開始引入其他地理群之種貝進行配種,證實透過雜交來提高物種的遺傳變異,確實有助於強化生物體適應外界多變環境之能力;然而近年來所採集之九孔樣本又逐漸出現基因多樣性降低,呈現遺傳變異同質性之趨勢。根據本研究追蹤結果顯示,人為選育確實會造成九孔遺傳變異降低,透過選擇差異度較高的種貝進行雜交雖可改善,但更重要的是,這些高遺傳變異種貝的保種、選育與管理。另外,為使養殖生物具備優異的養殖性狀 (成長、耐寒、抗熱等),如何維持雜交種的優勢也是關鍵因素

摘要abstract(英)


The small abalone (Haliotis diversicolor) is an extremely distinctive cultured species in Taiwan. The present study used the random amplified polymorphic DNA (RAPD) technique with the P3 locus pattern, to compare the genetic variation of small abalone collected from 2008 to 2021. Early results showed that small wild abalone had 8-12 polyphenotypic amplification bands, primarily between 0.1 kb and 1.0 kb, whereas the polyphenotypic amplification bands of cultured small abalone were mostly 1.0 kb, 0.8 kb, and 0.65 kb. In addition, some cultured small abalone samples presented differences in band depth (e.g., copy number variation, CNV) and also showed band omission, indicating that the genetic variation and survival rate of cultured small abalone have declined as the result of constant artificial selection.
The industry has improved the survival rate of cultured seedlings by introducing abalones from other geographic populations, which demonstrates that it is feasible to enhance the genetic variation of species through hybridization and to subsequently strengthen the ability of organisms to adapt to a changing environment. However, the samples collected in recent years have begun to show a reduction in genetic diversity and a trend in homogeneity of genetic variation.
In summary, this study demonstrated that genetic variation can be improved by selecting breeds with higher genetic variation for crossbreeding; however, the preservation, selection, and management of breeds with a higher degree of genetic variation are key factors for the success of this industry. Moreover, it is equally important to maintain and sustain the benefits of crossbreeding, in order to promote excellent breeding performance in the cultured organisms, including growth, cold tolerance, and heat resistance, among other factors.